ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cafB2 - ECOD Domain | ECOD

ECOD/Domains/e4cafB2

e4cafB2

UID: 001286713

PDB

Range: B:211-410
PDB: 4CAF chain B(all domains)
UniProt: A5K1A2 (all domains)
Gene: PVX_085815

Molecule: GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

4-[(2-{5-[(3,5-dimethyl-1H-pyrazol-4-yl)methyl]-1,3,4-oxadiazol-2-yl}-1-benzothiophen-3-yl)oxy]piperidine370
Chloride ionCL
2-oxopentadecyl-CoANHW

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 4CAF RCSB PDB: 4CAF PDBe: 4CAF UniProt: A5K1A2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 3 additives (Dimethyl sulfoxide, Sulfate ion, Ammonium ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4
DrugBank DB14546
Ammonium ionNH4

Shown in the structure viewer. Drug annotations from DrugDomain.