ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iubL3 - ECOD Domain | ECOD

ECOD/Domains/e4iubL3

e4iubL3

UID: 001286816

PDB

Range: L:337-407
PDB: 4IUB chain L(all domains)
UniProt: P31891 (all domains)
Gene: hoxG

Molecule: Uptake hydrogenase large subunit

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturebeta meanders(a.2)

XX-groupall-beta domain in nickel-iron hydrogenase large subunit(4046)

HH-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1)

TT-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1.1)

FFamilyNiFeSe_Hases(4046.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 4IUB RCSB PDB: 4IUB PDBe: 4IUB UniProt: P31891

Downloads

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Drug annotations from DrugDomain.