ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cclB1 - ECOD Domain | ECOD

ECOD/Domains/e4cclB1

e4cclB1

UID: 001288606

PDB

Range: B:1-266
PDB: 4CCL chain B(all domains)
UniProt: P27431 (all domains)
Gene: roxA

Molecule: 50S RIBOSOMAL PROTEIN L16 ARGININE HYDROXYLASE

3D Structure

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Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4CCL RCSB PDB: 4CCL PDBe: 4CCL UniProt: P27431

Downloads

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