ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ct7B1 - ECOD Domain | ECOD

ECOD/Domains/e4ct7B1

e4ct7B1

UID: 001289040

PDB

Range: B:16-284
PDB: 4CT7 chain B(all domains)
UniProt: Q92600 (all domains)
Gene: CNOT9

Molecule: CELL DIFFERENTIATION PROTEIN RCD1 HOMOLOG

3D Structure

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Related Domains

Browse other domains in Rcd1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyRcd1(109.4.1.60)

Ligands

in contact, ≤ 4 Å

TryptophanTRP
drugDrugBank DB00150

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Pfam Families

Cell differentiation family, Rcd1-like

ClanCL0020TPR

External Links

ECOD PDB View: 4CT7 RCSB PDB: 4CT7 PDBe: 4CT7 UniProt: Q92600

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.