ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3i31A1 - ECOD Domain | ECOD

ECOD/Domains/e3i31A1

e3i31A1

UID: 001289800

PDB

Range: A:423-498
PDB: 3I31 chain A(all domains)
UniProt: Q72GF3 (all domains)
Gene: TT_C1895

Molecule: Heat resistant RNA dependent ATPase

3D Structure

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Related Domains

Browse other domains in Hera_RBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyHera_RBD(304.9.1.35)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
Zinc ionZN
metal

+ 1 additive (Tromethamine)

TromethamineTRS

Pfam Families

PF22231Hera_RBD

DEAD box helicase Hera, RNA-binding domain

ClanCL0221RRM

External Links

ECOD PDB View: 3I31 RCSB PDB: 3I31 PDBe: 3I31 UniProt: Q72GF3

Downloads

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DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.