ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4kxnA1 - ECOD Domain | ECOD

ECOD/Domains/e4kxnA1

e4kxnA1

UID: 001289906

PDB

Range: A:11-150
PDB: 4KXN chain A(all domains)
UniProt: O35820 (all domains)
Gene: Dnph1

Molecule: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

N-(furan-2-ylmethyl)adenosine 5'-(dihydrogen phosphate)6K6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4KXN RCSB PDB: 4KXN PDBe: 4KXN UniProt: O35820

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure