ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vbuA1 - ECOD Domain | ECOD

ECOD/Domains/e2vbuA1

e2vbuA1

UID: 000000129

RepresentativePDB

Range: A:2-132
PDB: 2VBU chain A(all domains)
UniProt: Q60365 (all domains)
Gene: ribK

Molecule: RIBOFLAVIN KINASE

3D Structure

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Related Domains

Browse other domains in CTP-dep_RFKase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyCTP-dep_RFKase(1.1.7.14)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-DiphosphateCDP
drugDrugBank DB04555
Magnesium ionMG
metal
(4R)-2-METHYLPENTANE-2,4-DIOL

Pfam Families

PF01982CTP-dep_RFKase

Domain of unknown function DUF120

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 2VBU RCSB PDB: 2VBU PDBe: 2VBU UniProt: Q60365

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.