ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pvzC1 - ECOD Domain | ECOD

ECOD/Domains/e3pvzC1

e3pvzC1

UID: 001290082

PDB

Range: C:3-384
PDB: 3PVZ chain C(all domains)
UniProt: Q5E8L1 (all domains)
Gene: VF_0140

Molecule: UDP-N-acetylglucosamine 4,6-dehydratase

3D Structure

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Related Domains

Browse other domains in Polysacc_synt_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPolysacc_synt_2(2003.1.1.34)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Thiocyanate ionSCN

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02719Polysacc_synt_2

Polysaccharide biosynthesis protein

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3PVZ RCSB PDB: 3PVZ PDBe: 3PVZ UniProt: Q5E8L1

Downloads

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