ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jq9B2 - ECOD Domain | ECOD

ECOD/Domains/e4jq9B2

e4jq9B2

UID: 001290356

PDB

Range: B:2-148,B:274-344
PDB: 4JQ9 chain B(all domains)
UniProt: C3TQA2 (all domains)
Gene: lpdA

Molecule: Dihydrolipoyl dehydrogenase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2+FAD_oxidored →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2+FAD_oxidored(2003.1.2.53)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

PF12831FAD_oxidored

FAD dependent oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4JQ9 RCSB PDB: 4JQ9 PDBe: 4JQ9 UniProt: C3TQA2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.