ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o9eA1 - ECOD Domain | ECOD

ECOD/Domains/e4o9eA1

e4o9eA1

UID: 001290423

PDB

Range: A:1-136
PDB: 4O9E chain A(all domains)
UniProt: Q6TFC5 (all domains)
Gene: qdtA

Molecule: QdtA

3D Structure

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Related Domains

Browse other domains in FdtA →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyFdtA(10.12.1.24)

Ligands

in contact, ≤ 4 Å

ThymineTDR
drugDrugBank DB03462
Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103
(2S)-1-[3-[(2S)-2-oxidanylpropoxy]-2-[[(2S)-2-oxidanylpropoxy]methyl]-2-[[(2R)-2-oxidanylpropoxy]methyl]propoxy]propan-2-ol

Pfam Families

WxcM-like, C-terminal

ClanCL0029Cupin

External Links

ECOD PDB View: 4O9E RCSB PDB: 4O9E PDBe: 4O9E UniProt: Q6TFC5

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.