ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jy0A2 - ECOD Domain | ECOD

ECOD/Domains/e4jy0A2

e4jy0A2

UID: 001290700

PDB

Range: A:1-357
PDB: 4JY0 chain A(all domains)
UniProt: O92972 (all domains)

Molecule: Genome polyprotein

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

(4S,5R)-1-(4-tert-butylbenzoyl)-2-(2-methylpropyl)-4-pyrazin-2-yl-5-(1,3-thiazol-2-yl)-L-proline1O9

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4JY0 RCSB PDB: 4JY0 PDBe: 4JY0 UniProt: O92972

Downloads

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