ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4livA1 - ECOD Domain | ECOD

ECOD/Domains/e4livA1

e4livA1

UID: 001291573

PDB

Range: A:36-300
PDB: 4LIV chain A(all domains)
UniProt: P27431 (all domains)
Gene: roxA

Molecule: 50S ribosomal protein L16 arginine hydroxylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in JmjC_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC_2(10.12.1.40)

Ligands

in contact, ≤ 4 Å

Succinic acidSIN
drugDrugBank DB00139
COBALT (II) IONCO
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4LIV RCSB PDB: 4LIV PDBe: 4LIV UniProt: P27431

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure