ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4oz1A1 - ECOD Domain | ECOD

ECOD/Domains/e4oz1A1

e4oz1A1

UID: 001291736

PDB

Range: A:412-522
PDB: 4OZ1 chain A(all domains)
UniProt: Q14498 (all domains)
Gene: RBM39

Molecule: RNA-binding protein 39

3D Structure

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Related Domains

Browse other domains in RBM39linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRBM39linker(304.9.1.24)

Ligands

in contact, ≤ 4 Å

LysineLYS
drugDrugBank DB00123
Chloride ionCL
Potassium ionK

Pfam Families

PF15519RBM39linker

linker between RRM2 and RRM3 domains in RBM39 protein

External Links

ECOD PDB View: 4OZ1 RCSB PDB: 4OZ1 PDBe: 4OZ1 UniProt: Q14498

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.