ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kbxA1 - ECOD Domain | ECOD

ECOD/Domains/e4kbxA1

e4kbxA1

UID: 001292010

RepresentativePDB

Range: A:35-276
PDB: 4KBX chain A(all domains)
UniProt: P45550 (all domains)
Gene: yhfX

Molecule: Uncharacterized protein YhfX

3D Structure

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Related Domains

Browse other domains in Ala_racemase_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAla_racemase_N(2002.1.1.53)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer.

Pfam Families

PF01168Ala_racemase_N

Alanine racemase, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4KBX RCSB PDB: 4KBX PDBe: 4KBX UniProt: P45550

Downloads

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Drug annotations from DrugDomain.