ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d0nB2 - ECOD Domain | ECOD

ECOD/Domains/e4d0nB2

e4d0nB2

UID: 001292510

PDB

Range: B:1970-2221
PDB: 4D0N chain B(all domains)
UniProt: Q12802 (all domains)
Gene: AKAP13

Molecule: A-KINASE ANCHOR PROTEIN 13

3D Structure

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Related Domains

Browse other domains in RhoGEF →

Classification

AArchitecturealpha bundles(a.7)

XX-groupDH domain-like(133)

HH-groupDBL homology domain (DH-domain)(133.1)

TT-groupDBL homology domain (DH-domain)(133.1.1)

FFamilyRhoGEF(133.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RhoGEF domain

ClanCL0852DH-like

External Links

ECOD PDB View: 4D0N RCSB PDB: 4D0N PDBe: 4D0N UniProt: Q12802

Downloads

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