ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o44A1 - ECOD Domain | ECOD

ECOD/Domains/e4o44A1

e4o44A1

UID: 001293048

PDB

Range: A:317-428
PDB: 4O44 chain A(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: HIV-1 reverse transcriptase, p66 subunit

3D Structure

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Related Domains

Browse other domains in RVT_connect →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRNaseH-like domain in reverse transcriptase(2484.5)

TT-groupRNaseH-like domain in reverse transcriptase(2484.5.1)

FFamilyRVT_connect(2484.5.1.1)

Ligands

in contact, ≤ 4 Å

4-({4-[3-(morpholin-4-yl)propoxy]-6-[(2,4,6-trimethylphenyl)amino]-1,3,5-triazin-2-yl}amino)benzonitrile2RS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06815RVT_connect

Reverse transcriptase connection domain

External Links

ECOD PDB View: 4O44 RCSB PDB: 4O44 PDBe: 4O44 UniProt: P03366

Downloads

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