ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bn8A1 - ECOD Domain | ECOD

ECOD/Domains/e4bn8A1

e4bn8A1

UID: 001293425

PDB

Range: A:2-202
PDB: 4BN8 chain A(all domains)
UniProt: Q9CED0 (all domains)
Gene: ytjD

Molecule: COPPER INDUCED NITROREDUCTASE D

3D Structure

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Related Domains

Browse other domains in Nitroreductase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyNitroreductase(304.103.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
P-NitrophenolNPO
drugDrugBank DB04417within 5 Å only

Shown in the structure viewer.

Pfam Families

PF00881Nitroreductase

Nitroreductase family

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 4BN8 RCSB PDB: 4BN8 PDBe: 4BN8 UniProt: Q9CED0

Downloads

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Drug annotations from DrugDomain.