ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d0mZ1 - ECOD Domain | ECOD

ECOD/Domains/e4d0mZ1

e4d0mZ1

UID: 001293616

PDB

Range: Z:6-178
PDB: 4D0M chain Z(all domains)
UniProt: P62491 (all domains)
Gene: RAB11A

Molecule: RAS-RELATED PROTEIN RAB-11A

3D Structure

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Related Domains

Browse other domains in Ras →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRas(2004.1.1.19)

Ligands

in contact, ≤ 4 Å

5'-Guanosine-Diphosphate-MonothiophosphateGSP
drugDrugBank DB01864
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ras family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4D0M RCSB PDB: 4D0M PDBe: 4D0M UniProt: P62491

Downloads

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