ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cocC1 - ECOD Domain | ECOD

ECOD/Domains/e4cocC1

e4cocC1

UID: 001294198

PDB

Range: C:148-221
PDB: 4COC chain C(all domains)
UniProt: P12497 (all domains)
Gene: gag-pol

Molecule: CAPSID PROTEIN P24

3D Structure

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Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 4COC RCSB PDB: 4COC PDBe: 4COC UniProt: P12497

Downloads

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