ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l1gC1 - ECOD Domain | ECOD

ECOD/Domains/e4l1gC1

e4l1gC1

UID: 001294340

PDB

Range: C:53-266
PDB: 4L1G chain C(all domains)
UniProt: Q81EK9 (all domains)
Gene: BC_1960

Molecule: Peptidoglycan N-acetylglucosamine deacetylase

3D Structure

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Related Domains

Browse other domains in Polysacc_deac_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupGlycoside hydrolase/deacetylase(2002.3)

TT-groupGlycoside hydrolase/deacetylase(2002.3.1)

FFamilyPolysacc_deac_1(2002.3.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01522Polysacc_deac_1

Polysaccharide deacetylase

ClanCL0158GH_CE

External Links

ECOD PDB View: 4L1G RCSB PDB: 4L1G PDBe: 4L1G UniProt: Q81EK9

Downloads

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