ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4oqpA1 - ECOD Domain | ECOD

ECOD/Domains/e4oqpA1

e4oqpA1

UID: 001294413

PDB

Range: A:58-311
PDB: 4OQP chain A(all domains)
UniProt: P39140 (all domains)
Gene: deoR

Molecule: Deoxyribonucleoside regulator

3D Structure

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Related Domains

Browse other domains in Sugar-bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNagB/RpiA/CoA transferase-like(2003.1.7)

FFamilySugar-bind(2003.1.7.8)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
COBALT (II) IONCO
metal
Magnesium ionMG

Pfam Families

PF04198Sugar-bind

Putative sugar-binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4OQP RCSB PDB: 4OQP PDBe: 4OQP UniProt: P39140

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

NICKEL (II) IONNI

metal

PENTANE-3,4-DIOL-5-PHOSPHATEPED

Shown in the structure viewer. Drug annotations from DrugDomain.