ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qagB1 - ECOD Domain | ECOD

ECOD/Domains/e4qagB1

e4qagB1

UID: 001294539

PDB

Range: B:425-557
PDB: 4QAG chain B(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Reverse transcriptase/ribonuclease H

3D Structure

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Related Domains

Browse other domains in RNase_H →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_H(2484.1.1.4)

Ligands

in contact, ≤ 4 Å

(7,8-dihydroxy-2-oxo-2H-chromen-4-yl)acetic acidF95
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00075RNase_H

RNase H

ClanCL0219RNase_H

External Links

ECOD PDB View: 4QAG RCSB PDB: 4QAG PDBe: 4QAG UniProt: P03366

Downloads

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