ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pe5B2 - ECOD Domain | ECOD

ECOD/Domains/e4pe5B2

e4pe5B2

UID: 001295270

RepresentativePDB

Range: B:148-285
PDB: 4PE5 chain B(all domains)
UniProt: Q00960 (all domains)
Gene: Grin2b

Molecule: Glutamate receptor ionotropic, NMDA 2B

3D Structure

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Related Domains

Browse other domains in ANF_receptor →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyANF_receptor(2007.1.2.4)

Ligands

in contact, ≤ 4 Å

4-[(1R,2S)-2-(4-benzylpiperidin-1-yl)-1-hydroxypropyl]phenolQEL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01094ANF_receptor

Receptor family ligand binding region

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 4PE5 RCSB PDB: 4PE5 PDBe: 4PE5 UniProt: Q00960

Downloads

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