ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d8eA1 - ECOD Domain | ECOD

ECOD/Domains/e4d8eA1

e4d8eA1

UID: 001295919

PDB

Range: A:146-398
PDB: 4D8E chain A(all domains)

Molecule: Streptopain

3D Structure

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Related Domains

Browse other domains in Peptidase_C10 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C10(219.1.1.10)

Ligands

in contact, ≤ 4 Å

4-[[(2S)-2-[[(2S)-3-Carboxy-2-hydroxypropanoyl]amino]-4-methylpentanoyl]amino]butyl-(diaminomethylidene)azaniumE64
drugDrugBank DB04276

+ 1 additive (Nitrate)

NitrateNO3

Pfam Families

PF01640Peptidase_C10

Peptidase C10 family

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4D8E RCSB PDB: 4D8E PDBe: 4D8E

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.