ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c6sA1 - ECOD Domain | ECOD

ECOD/Domains/e4c6sA1

e4c6sA1

UID: 001296137

PDB

Range: A:8-149
PDB: 4C6S chain A(all domains)
UniProt: E1B328 (all domains)
Gene: RRS1

Molecule: PROBABLE WRKY TRANSCRIPTION FACTOR 52

3D Structure

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Related Domains

Browse other domains in TIR →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupToll/Interleukin receptor TIR domain(2007.9)

TT-groupToll/Interleukin receptor TIR domain(2007.9.1)

FFamilyTIR(2007.9.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

TIR domain

ClanCL0173STIR

External Links

ECOD PDB View: 4C6S RCSB PDB: 4C6S PDBe: 4C6S UniProt: E1B328

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.