ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4olkA1 - ECOD Domain | ECOD

ECOD/Domains/e4olkA1

e4olkA1

UID: 001296399

PDB

Range: A:1-164
PDB: 4OLK chain A(all domains)
UniProt: D6QY02 (all domains)
Gene: lysGH15

Molecule: Endolysin

3D Structure

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Related Domains

Browse other domains in CHAP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCHAP(219.1.1.28)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676
Calcium ionCA
metal

Shown in the structure viewer.

Pfam Families

CHAP domain

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4OLK RCSB PDB: 4OLK PDBe: 4OLK UniProt: D6QY02

Downloads

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Drug annotations from DrugDomain.