ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4psmD1 - ECOD Domain | ECOD

ECOD/Domains/e4psmD1

e4psmD1

UID: 001296459

PDB

Range: D:2-148
PDB: 4PSM chain D(all domains)
UniProt: Q8U208 (all domains)
Gene: PF1044

Molecule: ssDNA binding protein

3D Structure

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Related Domains

Browse other domains in ThermoDBP-RP_arch →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L11/L12e N-terminal domain-like(3781)

HH-groupssDNA-binding protein ThermoDBP-related(3781.2)

TT-groupssDNA-binding protein ThermoDBP-related(3781.2.1)

FFamilyThermoDBP-RP_arch(3781.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10015ThermoDBP-RP_arch

ThermoDBP-related, archaea

External Links

ECOD PDB View: 4PSM RCSB PDB: 4PSM PDBe: 4PSM UniProt: Q8U208

Downloads

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