ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4psnB2 - ECOD Domain | ECOD

ECOD/Domains/e4psnB2

e4psnB2

UID: 001296463

PDB

Range: B:0-113
PDB: 4PSN chain B(all domains)
UniProt: Q9YAS7 (all domains)
Gene: APE_1866.1

Molecule: ssDNA binding protein

3D Structure

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Related Domains

Browse other domains in ThermoDBP-RP_arch →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L11/L12e N-terminal domain-like(3781)

HH-groupssDNA-binding protein ThermoDBP-related(3781.2)

TT-groupssDNA-binding protein ThermoDBP-related(3781.2.1)

FFamilyThermoDBP-RP_arch(3781.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10015ThermoDBP-RP_arch

ThermoDBP-related, archaea

External Links

ECOD PDB View: 4PSN RCSB PDB: 4PSN PDBe: 4PSN UniProt: Q9YAS7

Downloads

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