ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4psoB1 - ECOD Domain | ECOD

ECOD/Domains/e4psoB1

e4psoB1

UID: 001296468

PDB

Range: B:114-218
PDB: 4PSO chain B(all domains)
UniProt: Q9YAS7 (all domains)
Gene: APE_1866.1

Molecule: ssDNA binding protein

3D Structure

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Related Domains

Browse other domains in Thermo-DBP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupThermo-DBP-RP2 C-terminal domain(216.2)

TT-groupThermo-DBP-RP2 C-terminal domain(216.2.1)

FFamilyThermo-DBP(216.2.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20754Thermo-DBP

Thermo-DBP-RP2 C-terminal domain

External Links

ECOD PDB View: 4PSO RCSB PDB: 4PSO PDBe: 4PSO UniProt: Q9YAS7

Downloads

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