ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l5aD1 - ECOD Domain | ECOD

ECOD/Domains/e4l5aD1

e4l5aD1

UID: 001296846

PDB

Range: D:3-291
PDB: 4L5A chain D(all domains)
UniProt: I0B503 (all domains)

Molecule: S-methyl-5'-thioadenosine phosphorylase

3D Structure

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Related Domains

Browse other domains in PNP_UDP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPNP_UDP_1(2011.2.1.1)

Ligands

in contact, ≤ 4 Å

TubercidinTBN
drugDrugBank DB03172

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF01048PNP_UDP_1

Phosphorylase superfamily

ClanCL0408PUP

External Links

ECOD PDB View: 4L5A RCSB PDB: 4L5A PDBe: 4L5A UniProt: I0B503

Downloads

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Drug annotations from DrugDomain.