ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lgrA1 - ECOD Domain | ECOD

ECOD/Domains/e4lgrA1

e4lgrA1

UID: 001296880

PDB

Range: A:5-259
PDB: 4LGR chain A(all domains)
UniProt: P02879 (all domains)

Molecule: Ricin

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Acetic acid, 1,2-ETHANEDIOL)

Acetic acidACY

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 4LGR RCSB PDB: 4LGR PDBe: 4LGR UniProt: P02879

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03166

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.