ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lmxF1 - ECOD Domain | ECOD

ECOD/Domains/e4lmxF1

e4lmxF1

UID: 001296906

PDB

Range: F:2-177
PDB: 4LMX chain F(all domains)
UniProt: U5T8W0 (all domains)

Molecule: cryptophyte phycoerythrin (beta chain)

3D Structure

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Related Domains

Browse other domains in Phycobilisome →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyPhycobilisome(106.1.1.2)

Ligands

in contact, ≤ 4 Å

15,16-DIHYDROBILIVERDINDBV
PhycoerythrobilinPEB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00502Phycobilisome

Phycobilisome protein

ClanCL0090Globin

External Links

ECOD PDB View: 4LMX RCSB PDB: 4LMX PDBe: 4LMX UniProt: U5T8W0

Downloads

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