ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lmxE1 - ECOD Domain | ECOD

ECOD/Domains/e4lmxE1

e4lmxE1

UID: 001296911

PDB

Range: E:1-66
PDB: 4LMX chain E(all domains)
UniProt: U5TBJ3 (all domains)
Gene: HAND1043_LOCUS7931

Molecule: cryptophyte phycoerythrin (alpha-1/alpha-2 chain)

3D Structure

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Related Domains

Browse other domains in Phycoerythr_ab →

Classification

AArchitectureextended segments(a.20)

XX-groupPhycoerythrin 545 alpha-subunits(851)

HH-groupPhycoerythrin 545 alpha-subunits(851.1)

TT-groupPhycoerythrin 545 alpha-subunits(851.1.1)

FFamilyPhycoerythr_ab(851.1.1.1)

Ligands

in contact, ≤ 4 Å

15,16-DIHYDROBILIVERDINDBV
PhycoerythrobilinPEB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02972Phycoerythr_ab

Phycoerythrin, alpha/beta chain

External Links

ECOD PDB View: 4LMX RCSB PDB: 4LMX PDBe: 4LMX UniProt: U5TBJ3

Downloads

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