ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4m8dF1 - ECOD Domain | ECOD

ECOD/Domains/e4m8dF1

e4m8dF1

UID: 001296933

PDB

Range: F:1-263
PDB: 4M8D chain F(all domains)
UniProt: A0NLY7 (all domains)
Gene: SIAM614_09648

Molecule: Putative uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Cyclase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyCyclase(2487.1.1.9)

Ligands

in contact, ≤ 4 Å

oxo(2-sulfanylphenyl)acetic acid23J
Calcium ionCA
metal
MANGANESE (II) IONMN

Pfam Families

PF04199Cyclase

Putative cyclase

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 4M8D RCSB PDB: 4M8D PDBe: 4M8D UniProt: A0NLY7

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.