ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4msdA1 - ECOD Domain | ECOD

ECOD/Domains/e4msdA1

e4msdA1

UID: 001296970

PDB

Range: A:249-433
PDB: 4MSD chain A(all domains)
UniProt: Q9P371 (all domains)
Gene: sst2

Molecule: AMSH-like protease sst2

3D Structure

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Related Domains

Browse other domains in JAB →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilyJAB(2492.1.1.2)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

JAB1/Mov34/MPN/PAD-1 ubiquitin protease

ClanCL0366JAB

External Links

ECOD PDB View: 4MSD RCSB PDB: 4MSD PDBe: 4MSD UniProt: Q9P371

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.