ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nhoA1 - ECOD Domain | ECOD

ECOD/Domains/e4nhoA1

e4nhoA1

UID: 001297060

PDB

Range: A:352-617
PDB: 4NHO chain A(all domains)
UniProt: Q9BUQ8 (all domains)
Gene: DDX23

Molecule: Probable ATP-dependent RNA helicase DDX23

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

3-(cyclohexylamino)propanesulfonic acidCXS
drugDrugBank DB02219
MERCURY (II) IONHG
metal

+ 2 additives (Sulfate ion, Glycerol)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4NHO RCSB PDB: 4NHO PDBe: 4NHO UniProt: Q9BUQ8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.