ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4o6hE1 - ECOD Domain | ECOD

ECOD/Domains/e4o6hE1

e4o6hE1

UID: 001297094

PDB

Range: E:356-558
PDB: 4O6H chain E(all domains)
UniProt: P09992 (all domains)
Gene: N

Molecule: Nucleoprotein

3D Structure

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Related Domains

Browse other domains in Arena_ncap_C →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyArena_ncap_C(2484.1.1.78)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17290Arena_ncap_C

Arenavirus nucleocapsid C-terminal domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 4O6H RCSB PDB: 4O6H PDBe: 4O6H UniProt: P09992

Downloads

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