ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4plbD2 - ECOD Domain | ECOD

ECOD/Domains/e4plbD2

e4plbD2

UID: 001297280

PDB

Range: D:635-1126
PDB: 4PLB chain D(all domains)
UniProt: P20831 (all domains)
Gene: gyrA

Molecule: Chimera protein of DNA gyrase subunits B and A

3D Structure

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Related Domains

Browse other domains in DNA_topoisoIV →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDNA_topoisoIV(101.1.2.9)

Ligands

in contact, ≤ 4 Å

6-[({(1r,4S)-1-[(1S)-2-(3-fluoro-6-methoxy-1,5-naphthyridin-4-yl)-1-hydroxyethyl]-2-oxabicyclo[2.2.2]oct-4-yl}amino)methyl]-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one31N
MANGANESE (II) IONMN
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00521DNA_topoisoIV

DNA gyrase/topoisomerase IV, subunit A

External Links

ECOD PDB View: 4PLB RCSB PDB: 4PLB PDBe: 4PLB UniProt: P20831

Downloads

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