ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pqxD2 - ECOD Domain | ECOD

ECOD/Domains/e4pqxD2

e4pqxD2

UID: 001297329

PDB

Range: D:108-242
PDB: 4PQX chain D(all domains)
UniProt: A5ZGW9 (all domains)

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in NigD_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233)

HH-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233.1)

TT-groupIg-like domain in putative lipoprotein BF3042-related proteins(3233.1.1)

FFamilyNigD_C(3233.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Isopropyl alcohol, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
Isopropyl alcoholIPA
DrugBank DB02325
1,2-ETHANEDIOL

Pfam Families

NigD-like C-terminal beta sandwich domain

External Links

ECOD PDB View: 4PQX RCSB PDB: 4PQX PDBe: 4PQX UniProt: A5ZGW9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.