ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uonB1 - ECOD Domain | ECOD

ECOD/Domains/e4uonB1

e4uonB1

UID: 001297595

PDB

Range: B:110-261
PDB: 4UON chain B(all domains)
UniProt: Q86925 (all domains)

Molecule: CAPSID PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S3(1.1.5.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00944Peptidase_S3

Alphavirus core protein

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 4UON RCSB PDB: 4UON PDBe: 4UON UniProt: Q86925

Downloads

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