ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wjqA1 - ECOD Domain | ECOD

ECOD/Domains/e2wjqA1

e2wjqA1

UID: 001298163

RepresentativePDB

Range: A:1-215
PDB: 2WJQ chain A(all domains)
UniProt: P69856 (all domains)
Gene: nanC

Molecule: PROBABLE N-ACETYLNEURAMINIC ACID OUTER MEMBRANE CHANNEL PROTEIN NANC

3D Structure

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Related Domains

Browse other domains in KdgM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyKdgM(5084.5.1.8)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
N-octaneOCT

+ 1 additive (Dodecyldimethylamine N-oxide)

Dodecyldimethylamine N-oxideLDA

Pfam Families

Oligogalacturonate-specific porin protein (KdgM)

ClanCL0193MBB

External Links

ECOD PDB View: 2WJQ RCSB PDB: 2WJQ PDBe: 2WJQ UniProt: P69856

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB04147

Shown in the structure viewer. Drug annotations from DrugDomain.