ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jejA1 - ECOD Domain | ECOD

ECOD/Domains/e4jejA1

e4jejA1

UID: 001298240

PDB

Range: A:4-244
PDB: 4JEJ chain A(all domains)
UniProt: A5FJK8 (all domains)
Gene: Fjoh_1584

Molecule: Geranylgeranylglyceryl phosphate synthase

3D Structure

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Related Domains

Browse other domains in His_biosynth, PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHis_biosynth, PcrB(2002.1.1.277)

Ligands

in contact, ≤ 4 Å

SN-GLYCEROL-1-PHOSPHATE1GP
Magnesium ionMG
metal

+ 2 additives (Triethylene glycol, Phosphate ion)

Triethylene glycolPGE

Pfam Families

PF00977His_biosynth

Histidine biosynthesis protein

ClanCL0036TIM_barrel

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4JEJ RCSB PDB: 4JEJ PDBe: 4JEJ UniProt: A5FJK8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.