ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lf2A2 - ECOD Domain | ECOD

ECOD/Domains/e4lf2A2

e4lf2A2

UID: 001298333

PDB

Range: A:139-457
PDB: 4LF2 chain A(all domains)
UniProt: Q6N0W9 (all domains)
Gene: cbbM

Molecule: Ribulose bisphosphate carboxylase

3D Structure

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Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 2 additives (Carbonate ion, Sulfate ion)

Carbonate ionCO3
DrugBank DB14531
Sulfate ion

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4LF2 RCSB PDB: 4LF2 PDBe: 4LF2 UniProt: Q6N0W9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.