ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n4rD1 - ECOD Domain | ECOD

ECOD/Domains/e4n4rD1

e4n4rD1

UID: 001298441

PDB

Range: D:19-169
PDB: 4N4R chain D(all domains)
UniProt: Q8ZQZ7 (all domains)
Gene: lptE

Molecule: LPS-assembly lipoprotein LptE

3D Structure

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Related Domains

Browse other domains in LptE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLptE(7503.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Cacodylate ion)

Cacodylate ionCAC
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lipopolysaccharide-assembly

ClanCL0342TolB_N

External Links

ECOD PDB View: 4N4R RCSB PDB: 4N4R PDBe: 4N4R UniProt: Q8ZQZ7

Downloads

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