ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4naeB1 - ECOD Domain | ECOD

ECOD/Domains/e4naeB1

e4naeB1

UID: 001298443

PDB

Range: B:1-227
PDB: 4NAE chain B(all domains)
UniProt: Q5L3C1 (all domains)
Gene: pcrB

Molecule: Heptaprenylglyceryl phosphate synthase

3D Structure

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Related Domains

Browse other domains in PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPcrB(2002.1.1.78)

Ligands

in contact, ≤ 4 Å

SN-GLYCEROL-1-PHOSPHATE1GP

+ 1 additive (2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL)

2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLPE4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4NAE RCSB PDB: 4NAE PDBe: 4NAE UniProt: Q5L3C1

Downloads

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