ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4q2bB1 - ECOD Domain | ECOD

ECOD/Domains/e4q2bB1

e4q2bB1

UID: 001298643

PDB

Range: B:23-366
PDB: 4Q2B chain B(all domains)
UniProt: Q88JL2 (all domains)
Gene: bcsZ

Molecule: Endo-1,4-beta-D-glucanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_8 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_8(109.2.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Formic acid, Sulfate ion)

Formic acidFMT
DrugBank DB01942
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01270Glyco_hydro_8

Glycosyl hydrolases family 8

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4Q2B RCSB PDB: 4Q2B PDBe: 4Q2B UniProt: Q88JL2

Downloads

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