ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4q35B1 - ECOD Domain | ECOD

ECOD/Domains/e4q35B1

e4q35B1

UID: 001298648

PDB

Range: B:1000-1149
PDB: 4Q35 chain B(all domains)
UniProt: Q83LX4 (all domains)
Gene: lptE

Molecule: LPS-assembly lipoprotein LptE

3D Structure

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Related Domains

Browse other domains in LptE →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTolB, N-terminal domain(7503)

HH-groupTolB, N-terminal domain(7503.1)

TT-groupTolB, N-terminal domain(7503.1.1)

FFamilyLptE(7503.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lipopolysaccharide-assembly

ClanCL0342TolB_N

External Links

ECOD PDB View: 4Q35 RCSB PDB: 4Q35 PDBe: 4Q35 UniProt: Q83LX4

Downloads

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