ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4omhB1 - ECOD Domain | ECOD

ECOD/Domains/e4omhB1

e4omhB1

UID: 001298724

RepresentativePDB

Range: B:13-294
PDB: 4OMH chain B(all domains)
UniProt: C9K1X5 (all domains)
Gene: CotB2

Molecule: Geranylgeranyl diphosphate cyclase

3D Structure

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Related Domains

Browse other domains in Terpene_syn_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTerpenoid synthases(141)

HH-groupTerpenoid synthases(141.1)

TT-groupTerpenoid synthases(141.1.1)

FFamilyTerpene_syn_C_2(141.1.1.8)

Ligands

in contact, ≤ 4 Å

3-(cyclohexylamino)propanesulfonic acidCXS
drugDrugBank DB02219
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF19086Terpene_syn_C_2

Terpene synthase family 2, C-terminal metal binding

ClanCL0613Terp_synthase

External Links

ECOD PDB View: 4OMH RCSB PDB: 4OMH PDBe: 4OMH UniProt: C9K1X5

Downloads

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