ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1aafA2 - ECOD Domain | ECOD

ECOD/Domains/e1aafA2

e1aafA2

UID: 001298763

PDB

Range: A:1-32
PDB: 1AAF chain A(all domains)
UniProt: P05961 (all domains)
Gene: gag-pol

Molecule: HIV-1 NUCLEOCAPSID PROTEIN

3D Structure

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Related Domains

Browse other domains in zf-CCHC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC(396.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00098zf-CCHC

Zinc knuckle

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 1AAF RCSB PDB: 1AAF PDBe: 1AAF UniProt: P05961

Downloads

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