ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fqeA1 - ECOD Domain | ECOD

ECOD/Domains/e4fqeA1

e4fqeA1

UID: 001298883

PDB

Range: A:1-216
PDB: 4FQE chain A(all domains)
UniProt: Q934G3 (all domains)
Gene: kdgM

Molecule: Oligogalacturonate-specific porin kdgM

3D Structure

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Related Domains

Browse other domains in KdgM →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyKdgM(5084.5.1.8)

Ligands

in contact, ≤ 4 Å

N-octaneOCT

+ 1 additive ((Hydroxyethyloxy)Tri(Ethyloxy)Octane)

(Hydroxyethyloxy)Tri(Ethyloxy)OctaneC8E
DrugBank DB04233

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Oligogalacturonate-specific porin protein (KdgM)

ClanCL0193MBB

External Links

ECOD PDB View: 4FQE RCSB PDB: 4FQE PDBe: 4FQE UniProt: Q934G3

Downloads

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